Dr Harald Oey

Tapia del Fierro, Andres, den Hamer, Bianca, Benetti, Natalia, Jansz, Natasha, Chen, Kelan, Beck, Tamara, Vanyai, Hannah, Gurzau, Alexandra D., Daxinger, Lucia, Xue, Shifeng, Ly, Thanh Thao Nguyen, Wanigasuriya, Iromi, Iminitoff, Megan, Breslin, Kelsey, Oey, Harald, Krom, Yvonne D., van der Hoorn, Dinja, Bouwman, Linde F., Johanson, Timothy M., Ritchie, Matthew E., Gouil, Quentin A., Reversade, Bruno, Prin, Fabrice, Mohun, Timothy, van der Maarel, Silvère M., McGlinn, Edwina, Murphy, James M., Keniry, Andrew, de Greef, Jessica C. and Blewitt, Marnie E. (2023). SMCHD1 has separable roles in chromatin architecture and gene silencing that could be targeted in disease. Nature Communications, 14 (1) 5466, 1-22. doi: 10.1038/s41467-023-40992-6

Muse, Meghan E., Schaider, Helmut, Oey, Harald, Soyer, H. Peter, Christensen, Brock C. and Stark, Mitchell S. (2023). Distinct HOX gene family DNA methylation profiles in histologically normal skin dependent on dermoscopic pattern of adjacent nevi. Journal of Investigative Dermatology, 143 (9), 1830-1834. doi: 10.1016/j.jid.2023.03.1653

Desai, Varsha P., Chouaref, Jihed, Wu, Haoyu, Pastor, William A., Kan, Ryan L., Oey, Harald M., Li, Zheng, Ho, Jamie, Vonk, Kelly K. D., San Leon Granado, David, Christopher, Michael A., Clark, Amander T., Jacobsen, Steven E. and Daxinger, Lucia (2021). The role of MORC3 in silencing transposable elements in mouse embryonic stem cells. Epigenetics and Chromatin, 14 (1) 49, 49. doi: 10.1186/s13072-021-00420-9

Aoude, Lauren G., Wong, Bernadette, Bonazzi, Vanessa F, Brosda, Sandra, Walters, Shaun B., Koufariotis, Lambros T., Naeini, Marjan M., Pearson, John V, Oey, Harald, Patel, Kalpana, Bradford, Julia J., Bloxham, Conor J, Atkinson, Victoria, Law, Phillip, Strutton, Geoffrey, Bayley, Gerard, Yang, Samuel, Smithers, B. Mark, Waddell, Nicola, Miles, Kenneth and Barbour, Andrew P. (2021). Radiomics biomarkers correlate with CD8 expression and predict immune signatures in melanoma patients. Molecular Cancer Research, 19 (6) molcanres.1038.2020, 950-956. doi: 10.1158/1541-7786.mcr-20-1038

Aoude, Lauren G., Bonazzi, Vanessa F., Brosda, Sandra, Patel, Kalpana, Koufariotis, Lambros T., Oey, Harald, Nones, Katia, Wood, Scott, Pearson, John V., Lonie, James M., Arneil, Melissa, Atkinson, Victoria, Smithers, B. Mark, Waddell, Nicola and Barbour, Andrew P. (2020). Pathogenic germline variants are associated with poor survival in stage III/IV melanoma patients. Scientific Reports, 10 (1) 17687, 17687. doi: 10.1038/s41598-020-74956-3

Shukla, Ankit, Nguyen, Thu H. M., Moka, Sarat B., Ellis, Jonathan J., Grady, John P., Oey, Harald, Cristino, Alexandre S., Khanna, Kum Kum, Kroese, Dirk P., Krause, Lutz, Dray, Eloise, Fink, J. Lynn and Duijf, Pascal H. G. (2020). Chromosome arm aneuploidies shape tumour evolution and drug response. Nature Communications, 11 (1) 449, 449. doi: 10.1038/s41467-020-14286-0

Nakamura, Kyohei, Casey, Mika, Oey, Harald, Vari, Frank, Stagg, John, Gandhi, Maher K. and Smyth, Mark J. (2020). Targeting an adenosine-mediated “don’t eat me signal” augments anti-lymphoma immunity by anti-CD20 monoclonal antibody. Leukemia, 34 (10), 2708-2721. doi: 10.1038/s41375-020-0811-3

Oey, Harald, Daniels, Marissa, Relan, Vandana, Chee, Tian Mun, Davidson, Morgan R., Yang, Ian A., Ellis, Jonathan J., Fong, Kwun M., Krause, Lutz and Bowman, Rayleen V. (2019). Whole-genome sequencing of human malignant mesothelioma tumours and cell lines. Carcinogenesis, 40 (6), 724-734. doi: 10.1093/carcin/bgz066

Oey, Harald, Zakrzewski, Martha, Gravermann, Kerstin, Young, Neil D., Korhonen, Pasi K., Gobert, Geoffrey N., Nawaratna, Sujeevi, Hasan, Shihab, Martínez, David M., You, Hong, Lavin, Martin, Jones, Malcolm K., Ragan, Mark A., Stoye, Jens, Oleaga, Ana, Emery, Aidan M., Webster, Bonnie, Rollinson, David, Gasser, Robin B., McManus, Donald P. and Krause, Lutz (2019). Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium. PLOS Pathogens, 15 (1) e1007513, e1007513. doi: 10.1371/journal.ppat.1007513

Oey, Harald, Zakrzewski, Martha, Narain, Kanwar, Devi, K Rekha, Agatsuma, Takeshi, Nawaratna, Sujeevi, Gobart, Geoffrey, Jones, Malcolm, Ragan, Mark A, McManus, Donald P and Krause, Lutz (2018). Whole-genome sequence of the oriental lung fluke Paragonimus westermani. GigaScience, 8 (1). doi: 10.1093/gigascience/giy146

Isbel, Luke, Prokopuk, Lexie, Wu, Haoyu, Daxinger, Lucia, Oey, Harald, Spurling, Alex, Lawther, Adam J., Hale, Matthew W. and Whitelaw, Emma (2016). Wiz binds active promoters and CTCF-binding sites and is required for normal behaviour in the mouse. eLife, 5 (JULY) e15082. doi: 10.7554/eLife.15082

Daxinger, Lucia, Oey, Harald, Isbel, Luke, Whitelaw, Nadia C., Youngson, Neil A., Spurling, Alex, Vonk, Kelly K. D. and Whitelaw, Emma (2016). Hypomethylation of ERVs in the sperm of mice haploinsufficient for the histone methyltransferase Setdb1 correlates with a paternal effect on phenotype. Scientific Reports, 6 (1) 25004, e25004.1-e25004.10. doi: 10.1038/srep25004

Oey, Harald, Isbel, Luke, Hickey, Peter, Ebaid, Basant and Whitelaw, Emma (2015). Genetic and epigenetic variation among inbred mouse littermates: Identification of inter-individual differentially methylated regions. Epigenetics and Chromatin, 8 (54) 47, 54. doi: 10.1186/s13072-015-0047-z

Harten, Sarah K., Oey, Harald, Bourke, Lauren M., Bharti, Vandhana, Isbel, Luke, Daxinger, Lucia, Faou, Pierre, Robertson, Neil, Matthews, Jacqueline M. and Whitelaw, Emma (2015). The recently identified modifier of murine metastable epialleles, Rearranged L-Myc Fusion, is involved in maintaining epigenetic marks at CpG island shores and enhancers. BMC Biology, 13 (21) 21, 1-15. doi: 10.1186/s12915-015-0128-2

Sorolla, Anabel, Tallack, Michael R., Oey, Harald, Harten, Sarah K., Daxinger, Lucia Clemens, Magor, Graham W., Combes, Alex N., Ilsley, Melissa, Whitelaw, Emma and Perkins, Andrew C. (2015). Identification of novel hypomorphic and null mutations in Klf1 derived from a genetic screen for modifiers of α-globin transgene variegation. Genomics, 105 (2), 116-122. doi: 10.1016/j.ygeno.2014.09.013

Isbel, Luke, Srivastava, Rahul, Oey, Harald, Spurling, Alex, Daxinger, Lucia, Puthalakath, Hamsa and Whitelaw, Emma (2015). Trim33 Binds and Silences a Class of Young Endogenous Retroviruses in the Mouse Testis; a Novel Component of the Arms Race between Retrotransposons and the Host Genome. PLoS Genetics, 11 (12) e1005693, 1-25. doi: 10.1371/journal.pgen.1005693

Oey, H. and Whitelaw, E. (2014). On the meaning of the word 'epimutation'. Trends in Genetics, 30 (12), 519-520. doi: 10.1016/j.tig.2014.08.005

Daxinger, Lucia, Harten, Sarah K., Oey, Harald, Epp, Trevor, Isbel, Luke, Huang, Edward, Whitelaw, Nadia, Apedaile, Anwyn, Sorolla, Anabel, Yong, Joan, Bharti, Vandhana, Sutton, Joanne, Ashe, Alyson, Pang, Zhenyi, Wallace, Nathan, Gerhardt, Daniel J., Blewitt, Marnie E., Jeddeloh, Jeffrey A. and Whitelaw, Emma (2013). An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse. Genome Biology, 14 (9) R96. doi: 10.1186/gb-2013-14-9-r96

Daxinger, Lucia, Oey, Harald, Apedaile, Anwyn, Sutton, Joanne, Ashe, Alyson and Whitelaw, Emma (2012). A forward genetic screen identifies eukaryotic translation initiation factor 3, subunit h (eiF3h), as an enhancer of variegation in the mouse. G3: Genes, Genomes, Genetics, 2 (11), 1393-1396. doi: 10.1534/g3.112.004036

Oey, Harald and Whitelaw, Emma (2012). Commentary: Gartner's 'third component': still an open question. International Journal of Epidemiology, 41 (2) dys009, 356-358. doi: 10.1093/ije/dys009

Oey, Harald M., Youngson, Neil A. and Whitelaw, Emma (2011). The characterisation of piRNA-related 19mers in the mouse. BMC Genomics, 12 (1) 315. doi: 10.1186/1471-2164-12-315

Taft, Ryan, Simons, Cas, Nahkuri, Satu, Oey, Harald, Korbie, Darren J., Mercer, Timothy R., Holst, Jeff, Ritchie, William, Wong, Justin J-L., Rasko, John E. J., Rokhsar, Daniel S., Degnan, Bernard M. and Mattick, John S. (2010). Nuclear-localized tiny RNAs are associated with transcription initiation and splice sites in metazoans. Nature Structural and Molecular Biology, 17 (8), 1030-1035. doi: 10.1038/nsmb.1841

Oey, H. M., Maguire D. J. and McCabe, M. (2008). Pseudogenes and the electron transport chain. Advances in Experimental Medicine & Biology, 599, 101-107. doi: 10.1007/978-0-387-71764-7

Muse, Meghan E., Schaider, Helmut, Oey, Harald, Soyer, H. Peter, Christensen, Brock C. and Stark, Mitchell S. (2023). Distinct HOX gene family DNA methylation profiles in histologically normal skin dependent on dermoscopic pattern of adjacent nevi. 114th Annual Meeting of the American Association for Cancer Research (AACR), Orlando Fl, Apr 14-19, 2023. PHILADELPHIA: AMER ASSOC CANCER RESEARCH. doi: 10.1158/1538-7445.AM2023-6000

Gandhi, M.K., Hoang, T., Tobin, J.W., Law, S.C., Talaulikar, D., Jain, S., Vari, F., Murigneux, V., Fink, L., Gunawardana, J., Gould, C., Oey, H., Delecluse, S., Trappe, R.U., Merida de Long, L., Sabdia, M.B., Bhagat, G., Hapgood, G., Blyth, E., Clancy, L., Casey, J., Wight, J., Hawkes, E. and Keane, C. (2019). EBV+ CNS lymphomas have a distinctive tumor microenvironment and genetic profile, which is amenable to combination 3rd party EBV-specific CTL and Ibrutinib therapy. 15th International Conference on Malignant Lymphoma, Lugano, Switzerland, 18–22 June 2019. Oxford, United Kingdom: John Wiley & Sons. doi: 10.1002/hon.91_2629

Chee, T. M., Oey, H., Fong, K., Yang, I., Krause, L. and Bowman, R. (2019). Fusion genes identified from whole genome and whole transcriptome sequencing of malignant pleural mesothelioma tumours. IASLC 2019 World Conference on Lung Cancer, Barcelona, Spain, 7-10 September 2019. New York, NY, United States: Elsevier . doi: 10.1016/j.jtho.2019.08.697

Gould, Clare, Keane, Colm, Murigneux, Valentine, Oey, Harald, Ellis, Jonathan, Birch, Simone, Gunawardana, Jay, Talaulikar, Dipti, Hertzberg, Mark S., Jones, Kimberley and Gandhi, Maher K. (2019). B2M Gene Expression Reflects an Immunologically Active Tumor Microenvironment in DLBCL. ASH Annual Meeting, Orlando, FL, United States, 7-10 December 2019. Washington, DC, United States: American Society of Hematology. doi: 10.1182/blood-2019-126537

Huang, Stephen, Gillinder, Kevin R., Ilsley, Melissa, Magor, Graham, Tallack, Michael, Sorolla, Anabel, Oey, Harald, Harten, Sarah, Clemens-Daxinger, Lucia, Whitelaw, Emma and Perkins, Andrew C. (2015). Characterisation of novel hypomorphic and null mutations in klf1 derived from a genetic screen for modifiers of a-globin transgene variegation. 57th Annual Meeting of the American Society of Hematology, Orlando, FL, United States, 5-8 December 2015. Washington, DC, United States: American Society of Hematology.

Maguire, David J., Oey, Harald and McCabe, Michael (2006). ALU sequences in the human respirome. Oxygen Transport to Tissue XXVII 32nd annual meeting of the International Society on Transport to Tissue, Bari, Italy, 21-26 August 20004. New York, NY, United States: Springer New York. doi: 10.1007/0-387-29540-2_12

Dr Harald Oey

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